Index A | C | D | E | F | G | H | I | K | L | M | N | O | P | R | S | U | V A add_complex() (sign_crn.reaction_networks.ReactionNetwork method) add_complexes() (sign_crn.reaction_networks.ReactionNetwork method) add_reaction() (sign_crn.reaction_networks.ReactionNetwork method) add_reactions() (sign_crn.reaction_networks.ReactionNetwork method) are_both_deficiencies_zero() (sign_crn.reaction_networks.ReactionNetwork method) are_kernel_matrices_defined() (sign_crn.conditions.ConditionsCRN method) are_reduced_matrices_defined() (sign_crn.conditions.ConditionsCRN method) C closure_condition() (in module sign_crn.conditions) (sign_crn.conditions.ConditionsCRN method) closure_condition_sign_vectors() (in module sign_crn.conditions) closure_minors_utility() (in module sign_crn.utility) Complex (class in sign_crn.reaction_networks) ConditionsCRN (class in sign_crn.conditions) D deficiency_kinetic_order (sign_crn.reaction_networks.ReactionNetwork property) deficiency_stoichiometric (sign_crn.reaction_networks.ReactionNetwork property) E equal_entries_lists() (in module sign_crn.utility) F face_condition() (in module sign_crn.conditions) (sign_crn.conditions.ConditionsCRN method) from_kernel_matrices() (sign_crn.conditions.ConditionsCRN static method) from_reduced_matrices() (sign_crn.conditions.ConditionsCRN static method) from_species() (sign_crn.reaction_networks.Complex static method) G get_coefficient() (sign_crn.reaction_networks.Complex method) H has_at_most_one_cbe() (sign_crn.reaction_networks.ReactionNetwork method) has_exactly_one_cbe() (sign_crn.reaction_networks.ReactionNetwork method) has_exactly_one_equilibrium() (sign_crn.reaction_networks.ReactionNetwork method) has_robust_cbe() (sign_crn.reaction_networks.ReactionNetwork method) I incidence_matrix() (sign_crn.reaction_networks.ReactionNetwork method) intervals_to_sign_vectors() (in module sign_crn.utility) involved_species() (sign_crn.reaction_networks.Complex method) is_weakly_reversible() (sign_crn.reaction_networks.ReactionNetwork method) K kinetic_order_kernel_matrix (sign_crn.conditions.ConditionsCRN property) kinetic_order_matrix (sign_crn.reaction_networks.ReactionNetwork property) kinetic_order_matrix_as_kernel (sign_crn.reaction_networks.ReactionNetwork property) L laplacian_matrix() (sign_crn.reaction_networks.ReactionNetwork method) M matrix_of_complexes_kinetic_order (sign_crn.reaction_networks.ReactionNetwork property) matrix_of_complexes_stoichiometric (sign_crn.reaction_networks.ReactionNetwork property) module sign_crn.conditions sign_crn.reaction_networks sign_crn.utility N non_negative_circuits_from_matrix() (in module sign_crn.utility) non_negative_cocircuits_from_matrix() (in module sign_crn.utility) non_negative_covectors_from_cocircuits() (in module sign_crn.utility) non_negative_covectors_from_matrix() (in module sign_crn.utility) non_negative_vectors_from_matrix() (in module sign_crn.utility) nondegeneracy_condition() (in module sign_crn.conditions) (sign_crn.conditions.ConditionsCRN method) O ode_rhs() (sign_crn.reaction_networks.ReactionNetwork method) P plot() (sign_crn.reaction_networks.ReactionNetwork method) R rate_constants() (sign_crn.reaction_networks.ReactionNetwork method) ReactionNetwork (class in sign_crn.reaction_networks) reactions (sign_crn.reaction_networks.ReactionNetwork property) reduced_kinetic_order_matrix (sign_crn.conditions.ConditionsCRN property) reduced_stoichiometric_matrix (sign_crn.conditions.ConditionsCRN property) remove_complex() (sign_crn.reaction_networks.ReactionNetwork method) remove_duplicates() (in module sign_crn.utility) remove_reaction() (sign_crn.reaction_networks.ReactionNetwork method) S set_rate_constant_variable() (sign_crn.reaction_networks.ReactionNetwork method) sign_crn.conditions module sign_crn.reaction_networks module sign_crn.utility module sign_or_symbolic() (in module sign_crn.utility) sign_vector_to_intervals() (in module sign_crn.utility) source_matrix() (sign_crn.reaction_networks.ReactionNetwork method) species (sign_crn.reaction_networks.ReactionNetwork property) species() (in module sign_crn.reaction_networks) stoichiometric_kernel_matrix (sign_crn.conditions.ConditionsCRN property) stoichiometric_matrix (sign_crn.reaction_networks.ReactionNetwork property) stoichiometric_matrix_as_kernel (sign_crn.reaction_networks.ReactionNetwork property) U uniqueness_condition() (in module sign_crn.conditions) (sign_crn.conditions.ConditionsCRN method) uniqueness_condition_sign_vectors() (in module sign_crn.conditions) V vector_from_sign_vector() (in module sign_crn.utility)